Home Duke University Press
 QUICK SEARCH:   [advanced]


     
  Home | Help | Feedback | Subscriptions | Archive | Search | Table of Contents


Neuro Oncol 2000 2(1):1-5; DOI:10.1215/15228517-2-1-1
This Article
Right arrow Abstract Freely available
Right arrow Full Text (PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Right arrow Citation Map
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via ISI Web of Science (9)
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Newsham, I. F.
Right arrow Articles by Bögler, O.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Duke University Press

Molecular Genetics

Use of horizontal ultrathin gel electrophoresis to analyze allelic deletions in chromosome band 11p15.5 in gliomas

Irene F. Newsham, Karen M. Gorse, Sandra A. Rempel, John Luckey, James B. Golden and Oliver Bögler2

Departments of Anatomy (I.F.N., K.M.G., O.B.), Pathology (I.F.N.), and Neurosurgery (O.B.), Medical College of Virginia Campus at Virginia Commonwealth University, Richmond, VA 23298; Department of Neurosurgery, Henry Ford Health Sciences Center, Detroit, MI 48202 (S.A.R.); and GeneSys Technologies, Inc., 1100 Dallas Street, Sauk City, WI 53583 (J.L., J.B.G.)

2 Address correspondence and reprint requests to Oliver Bögler, Ph.D., Departments of Anatomy and Neurosurgery, Virginia Commonwealth University, PO Box 980709, Richmond, VA 23298-0709.

Abstract

The prognosis for most patients with astrocytic glioma is poor, and postoperative life expectancy has not significantly improved in the last decade despite advances in diagnosis, surgery, and adjuvant therapy. Progress has been made, however, in cataloging the genetic alterations that occur in these tumors. Studying the allelic changes using loss of heterozygosity analysis has proven to be a reliable and rapid way of identifying genetic alterations fundamental to the pathology of this disease. In this study, we used a series of fluorescent-labeled markers and a new horizontal ultrathin gel electrophoresis technology (HUGE; GeneSys Technologies, Inc.) to analyze loss of heterozygosity on 11p15 in a series of 24 matched normal/tumor glioma pairs that included both anaplastic astrocytomas and glioblastomas. These studies significantly narrowed the region harboring a putative 11p15.5 glioma-associated gene and further suggest that a second gene involved in the pathogenesis of brain tumors may exist, centromeric, in bands 11p15.5-p15.4.

References

Baffa, R., Negrini, M., Mandes, B., Rugge, M., Ranzini, G.N., Hirohaski, S., and Croce, C.M. (1996) Loss of heterozygosity for chromosome 11 in adenocarcinoma of the stomach. Cancer Res. 56,268 -272.[Abstract/Free Full Text]

Bello, M.J., Vaquero, J., de Campos, J.M., Kusak, M.E., Sarasa, J.L., Saez-Castresana, J., Pestana, A., and Rey, J.A. (1994) Molecular analysis of chromosome 1 abnormalities in human glioma reveals frequent loss of 1p in oligodendroglial tumors. Int. J. Cancer 57,172 -175.[ISI][Medline]

Bögler, O., Huang, H.-J.S., Kleihues, P., and Cavenee, W.K. (1995) The p53 gene and its role in human brain tumors. Glia 15,308 -327.[CrossRef][ISI][Medline]

Cawkwell, L., Bell, S.M., Lewis, F.A., Dixon, M.F., Taylor, G.R., and Quirke, P. (1993) Rapid detection of allele loss in colorectal tumours using microsatellite and fluorescent DNA technology. Br. J. Cancer 67,1262 -1267.[ISI][Medline]

Fults, D., Petronio, J., Noblett, B.D., and Pedone, C.A. (1992) Chromosome 11p15 deletions in human malignant astrocytomas and primitive neuroectodermal tumors. Genomics 14,799 -801.[CrossRef][ISI][Medline]

Furnari, F.B., Huang, H.-J.S., and Cavenee, W.K. (1995) Genetics and malignant progression of human brain tumours. Cancer Surv. 25,233 -275.[ISI][Medline]

Karnik, P., Paris, M., Williams, B.R., Casey, G., Crowe, J., and Chen, P. (1998) Two distinct tumor suppressor loci within chromosome 11p15 implicated in breast cancer progression and metastasis. Hum. Mol. Genet. 7,895 -903.[Abstract/Free Full Text]

Kleihues, P., Burger, P.C., and Scheitnauer, B.W. (1993) The new WHO classification of brain tumours. Brain Pathol. 3,255 -268.[ISI][Medline]

Kraus, J.A., Koopmann, J., Kaskel, P., Maintz, D., Brandner, S., Schramm, J., Louis, D.N., Wiestler, O.D., and von Deimling, A. (1995) Shared allelic losses on chromsomes 1p and 19q suggest a common origin of oligodendroglioma and oligoastrocytoma. J. Neuropath. Exp. Neurol. 54,91 -95.[ISI][Medline]

Li, J., Yen, C., Liaw, D., Podsypanina, K., Bose, S., Wang, S.I., Puc, J., Miliaresis, C., Rodgers, L., McCombie, R., Bigner, S.H., Giovanella, B.C., Ittman, M., Tycko, B., Hibshoosh, H., Wigler, M.H., and Parsons, R. (1997) PTEN, a putative protein tyrosine phosphatase gene mutated in human brain, breast, and prostate cancer. Science 275,1943 -1947.[Abstract/Free Full Text]

Shaw, M., and Knowles, M. (1995) Deletion mapping of chromosome 11 in carcinoma of the bladder. Genes Chromosomes Cancer 13,1 -8.[ISI][Medline]

Sonoda, Y., Lizuka, M., Yasuda, J., Makino, R., Ono, T., Kayama, T., Yoshimoto, T., and Sekiya, T. (1995) Loss of heterozygosity at 11p15 in malignant glioma. Cancer Res. 55,2166 -2168.[Abstract/Free Full Text]

Steck, P.A., Pershouse, M.A., Jasser, S.A., Yung, W.K.A., Lin, H., Ligon, A.H., Langford, L.A., Baumgard, M.L., Hattier, T., Davis, T., Frye, C., Hu, R., Swedlund, B., Teng, D.H.F., and Tavtigian, S.V. (1997) Identification of a candidate tumour suppressor gene, MMAC1, at chromosome 10q23.3 that is mutated in multiple advanced cancers. Nature Genet. 15,356 -362.[CrossRef][ISI][Medline]

Tran, Y.K., and Newsham, I.F. (1996) High density marker analysis of 11p15.5 in non-small cell lung carcinomas reveals allelic deletion of one shared and one distinct region when compared to breast carcinomas. Cancer Res. 56,2916 -2921.[Abstract/Free Full Text]

Tran, Y., Benbatoul, K., Gorse, K., Rempel, S., Futreal, A., Green, M., and Newsham, I. (1998) Novel regions of allelic deletion on chromosome 18p in tumors of the lung, brain and breast. Oncogene 17,3499 -3505.[CrossRef][ISI][Medline]

Viel, A., Giannini, F., Tumiotto, L., Sopracordevole, F., Visentin, M.C., and Boiochhi, M. (1992) Chromosomal localisation of two putative 11p onco-suppressor genes involved in human ovarian tumours. Br. J. Cancer 66,1030 -1036.[Medline]

von Deimling, A., Eibl, R.H., Ohgaki, H., Louis, D.N., von Ammon, K., Petersen, I., Kleihues, P., Chung, R.Y., Wiestler, O.D., and Seizinger, B.R. (1992) p53 mutations are associated with 17p allelic loss in grade II and grade III astrocytoma. Cancer Res. 52,2987 -2990.[Abstract/Free Full Text]

Winqvist, R., Hampton, G.M., Mannermaa, A., Blanco, G., Alavaikko, M., Kiviniemi, H., Taskinen, P.J., Evans, G.A., Wright, F.A., Newsham, I., and Cavenee, W. (1995) Loss of heterozygosity for chromosome 11 in primary human breast tumors is associated with poor survival after metastasis. Cancer Res. 55,2660 -2664.[Abstract/Free Full Text]




This article has been cited by other articles:


Home page
Clin. Cancer Res.Home page
D. Mihaila, M. Jankowski, J. A. Gutierrez, M. L. Rosenblum, I. F. Newsham, O. Bogler, and S. A. Rempel
Meningiomas: Loss of Heterozygosity on Chromosome 10 and Marker-Specific Correlations with Grade, Recurrence, and Survival
Clin. Cancer Res., October 1, 2003; 9(12): 4443 - 4451.
[Abstract] [Full Text] [PDF]


Home page
Clin. Cancer Res.Home page
J. A. Biegel, L. Tan, F. Zhang, L. Wainwright, P. Russo, and L. B. Rorke
Alterations of the hSNF5/INI1 Gene in Central Nervous System Atypical Teratoid/Rhabdoid Tumors and Renal and Extrarenal Rhabdoid Tumors
Clin. Cancer Res., November 1, 2002; 8(11): 3461 - 3467.
[Abstract] [Full Text] [PDF]


This Article
Right arrow Abstract Freely available
Right arrow Full Text (PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Right arrow Citation Map
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrow reprints & permissions
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via ISI Web of Science (9)
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Newsham, I. F.
Right arrow Articles by Bögler, O.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation


  Home | Help | Feedback | Subscriptions | Archive | Search | Table of Contents


Copyright 2000 by Society for Neuro-Oncology